wwPDB entry 7ucf

 Summary
Title: Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Keywords: broadly neutralizing antibody, bNAb, HIV-1, CD4 binding site, VH1-2, VRC01-class, antiviral protein, VIRAL PROTEIN-IMMUNE SYSTEM complex
Source: Human immunodeficiency virus 1, HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution:
Release date: 2022-08-17
 Protein Entities: 6
 Non-Protein Entities: 16
 Glycan structures: 13
Structure entry #230 [1 instances]
a-L-Fucp-(1-6)-b-D-GlcpNAc-(1-4)-Asn
1H: 1 : 266  : 14  Taxons: 4

Structure entry #548: N-Glycan fragment GlcNAc2 [3 instances]
b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 4168  : 6  Taxons: 1

Structure entry #1517: N-Glycan core structure linked to Asn [1 instances]
a-D-Manp-(1-6)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
1H: 1 : 603  : 40  Taxons: 5

Structure entry #27408 [1 instances]
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)-a-D-Manp-(1-6)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-ASN | a-D-Manp-(1-3)+
: 7  : 1  Taxons

Structure entry #231: M2 N-glycan linked to Asn [1 instances]
a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
1H: 1 : 222  : 22  Taxons: 2

Structure entry #551: N-Glycan fragment GlcNAc2Man1 [2 instances]
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 1445  : 12  Taxons: 3

Structure entry #1516 [1 instances]
a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 526  : 2  Taxons

Structure entry #22910 [1 instances]
b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-ASN
: 67  no Ref Taxons

Structure entry #287 [1 instances]
a-D-Manp-(1-6)+ | a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
1H: 1 : 21  : 13  Taxons: 4

Structure entry #288: Man-5 N-glycan M5A2BC linked to Asn [1 instances]
a-D-Manp-(1-6)+ | a-D-Manp-(1-6)+ | | a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
1H: 1 : 110  : 96  Taxons: 12

Structure entry #27844 [1 instances]
b-D-Manp-(1-4)-a-D-Manp-(1-6)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-ASN | a-D-Manp-(1-3)+
: 3  no Ref Taxons

Structure entry #7440: M1F N-glycan linked to Asn [1 instances]
a-L-Fucp-(1-6)+ | b-D-GlcpNAc-(1-4)-Asn | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)+
: 170  : 7  Taxons

Structure entry #229: N-Glycan fragment GlcNAc1 [3 instances]
b-D-GlcpNAc-(1-4)-Asn
1H: 1 : 7497  : 16  Taxons: 3
 Literature
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