wwPDB entry 6utk
Title: Crystal structure of 438-B11 Fab in complex with an uncleaved prefusion optimized (UFO) soluble BG505 trimer and Fab 35O22 at 3.80 Angstrom
Description: 35O22 Fab Heavy Chain, 35O22 Fab Light Chain, B11 Fab Light Chain, Envelope glycoprotein gp120, Envelope glycoprotein gp41, B11 Fab Heavy chain
Keywords: HIV-1 gp160, glycan supersite, human antibody, immune system, viral-protein complex, VIRAL PROTEIN-IMMUNE SYSTEM complex
Source: Homo sapiens, Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8ÅRelease date: 2020-09-23
Structure entry #551: N-Glycan fragment GlcNAc2Man1 [4 instances]
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
 |
 |
 : 1478 |
 : 12 |
 |
Taxons: 3 |
Structure entry #31576 [1 instances]
a-D-Manp-(1-2)-a-D-Manp-(1-6)+
|
a-D-Manp-(1-6)+
| |
a-D-Manp-(1-2)-a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-GlcpNAc-(1-4)-ASN
|
a-D-Manp-(1-2)-a-D-Manp-(1-3)+
|
|
: 1 |
no Ref |
|
Taxons |
Structure entry #548: N-Glycan fragment GlcNAc2 [3 instances]
b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
|
: 4263 |
: 6 |
|
Taxons: 1 |
Structure entry #1516 [2 instances]
a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
|
: 536 |
: 2 |
|
Taxons |
Structure entry #298: Man-9 N-glycan linked to Asn [1 instances]
a-D-Manp-(1-2)-a-D-Manp-(1-6)+
|
a-D-Manp-(1-6)+
| |
a-D-Manp-(1-2)-a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)+
|
 1H: 1 |
: 19 |
: 73 |
|
Taxons: 11 |
Structure entry #3099 [1 instances]
a-D-Manp-(1-3)-a-D-Manp-(1-6)+
|
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
a-D-Manp-(1-3)+
|
|
: 119 |
: 8 |
|
Taxons: 2 |
Structure entry #288: Man-5 N-glycan M5A2BC linked to Asn [1 instances]
a-D-Manp-(1-6)+
|
a-D-Manp-(1-6)+
| |
a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
a-D-Manp-(1-3)+
|
1H: 1 |
: 112 |
: 97 |
|
Taxons: 12 |
Structure entry #1517: N-Glycan core structure linked to Asn [1 instances]
a-D-Manp-(1-6)+
|
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
|
a-D-Manp-(1-3)+
|
1H: 1 |
: 612 |
: 42 |
|
Taxons: 5 |
Structure entry #27537 [1 instances]
b-D-GlcpNAc-(1-3)-b-D-GlcpNAc-(1-4)-ASN
|
|
: 14 |
no Ref |
|
Taxons |
Structure entry #229: N-Glycan fragment GlcNAc1 [8 instances]
b-D-GlcpNAc-(1-4)-Asn
|
1H: 1 |
: 7675 |
: 16 |
|
Taxons: 3 |
