wwPDB entry 6utk

 Summary
Title: Crystal structure of 438-B11 Fab in complex with an uncleaved prefusion optimized (UFO) soluble BG505 trimer and Fab 35O22 at 3.80 Angstrom
Description: 35O22 Fab Heavy Chain, 35O22 Fab Light Chain, B11 Fab Light Chain, Envelope glycoprotein gp120, Envelope glycoprotein gp41, B11 Fab Heavy chain
Keywords: HIV-1 gp160, glycan supersite, human antibody, immune system, viral-protein complex, VIRAL PROTEIN-IMMUNE SYSTEM complex
Source: Homo sapiens, Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8Å
Release date: 2020-09-23
 Protein Entities: 6
 Non-Protein Entities: 10
 Glycan structures: 10
Structure entry #551: N-Glycan fragment GlcNAc2Man1 [4 instances]
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 1478  : 12  Taxons: 3

Structure entry #31576 [1 instances]
a-D-Manp-(1-2)-a-D-Manp-(1-6)+ | a-D-Manp-(1-6)+ | | a-D-Manp-(1-2)-a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-GlcpNAc-(1-4)-ASN | a-D-Manp-(1-2)-a-D-Manp-(1-3)+
: 1  no Ref Taxons

Structure entry #548: N-Glycan fragment GlcNAc2 [3 instances]
b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 4263  : 6  Taxons: 1

Structure entry #1516 [2 instances]
a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
: 536  : 2  Taxons

Structure entry #298: Man-9 N-glycan linked to Asn [1 instances]
a-D-Manp-(1-2)-a-D-Manp-(1-6)+ | a-D-Manp-(1-6)+ | | a-D-Manp-(1-2)-a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)+
1H: 1 : 19  : 73  Taxons: 11

Structure entry #3099 [1 instances]
a-D-Manp-(1-3)-a-D-Manp-(1-6)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
: 119  : 8  Taxons: 2

Structure entry #288: Man-5 N-glycan M5A2BC linked to Asn [1 instances]
a-D-Manp-(1-6)+ | a-D-Manp-(1-6)+ | | a-D-Manp-(1-3)+ b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
1H: 1 : 112  : 97  Taxons: 12

Structure entry #1517: N-Glycan core structure linked to Asn [1 instances]
a-D-Manp-(1-6)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn | a-D-Manp-(1-3)+
1H: 1 : 612  : 42  Taxons: 5

Structure entry #27537 [1 instances]
b-D-GlcpNAc-(1-3)-b-D-GlcpNAc-(1-4)-ASN
: 14  no Ref Taxons

Structure entry #229: N-Glycan fragment GlcNAc1 [8 instances]
b-D-GlcpNAc-(1-4)-Asn
1H: 1 : 7675  : 16  Taxons: 3
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