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Glycosciences.DB structure entry #729:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
[][ASN]{[(4+1)][B-D-GLCPNAC]{[(4+1)][B-D-GLCPNAC]{[(4+1)][B-D-MANP]{[(3+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}[(4+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}[(6+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}[(6+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}}}}}
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="2" name="n-acetyl" />
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="4" name="n-acetyl" />
<basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="6" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="8" name="n-acetyl" />
<basetype id="9" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="10" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="11" name="n-acetyl" />
<basetype id="12" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="13" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="14" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="15" name="n-acetyl" />
<basetype id="16" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="17" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="18" name="n-acetyl" />
<basetype id="19" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="1" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="3" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="5" child="6">
<linkage id="5" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="6" parent="6" child="7">
<linkage id="6" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="7" parent="7" child="8">
<linkage id="7" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="8" parent="7" child="9">
<linkage id="8" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="9" parent="6" child="10">
<linkage id="9" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="10" parent="10" child="11">
<linkage id="10" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="11" parent="10" child="12">
<linkage id="11" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="12" parent="5" child="13">
<linkage id="12" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="13" parent="13" child="14">
<linkage id="13" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="14" parent="14" child="15">
<linkage id="14" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="15" parent="14" child="16">
<linkage id="15" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="16" parent="13" child="17">
<linkage id="16" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="17" parent="17" child="18">
<linkage id="17" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="18" parent="17" child="19">
<linkage id="18" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
<aglyca>
<historicalData>
<entry id="0" name="ASN" toResidue="1">
<linkage parentType="n" childType="x">
<parent pos="4" />
<child pos="1" />
</linkage>
</entry>
</historicalData>
</aglyca>
</sugar>
3D Structure Model1 - 5 of 6 entries with matching glycan part
Structure entry #239:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn-(1-2)-Gly-(1-2)-Thr
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
 |
 |
 |
 : 5 |
 |
Taxons: 1 |
Structure entry #240:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | |
| | Asn-(1-2)-Lys
a-D-Manp-(1-3)+ |
| Thr-(1-2)-Pro-(1-2)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
 |
 1H: 1 |
|
: 2 |
|
Taxons: 1 |
Structure entry #4950:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | |
| | Asn-(1-2)-Ala
a-D-Manp-(1-3)+ |
| Thr-(1-2)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
|
|
|
: 1 |
|
Taxons: 1 |
Structure entry #5730:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-7)-<7-amino-4-methyl-2h-1-benzopyran-2-one>
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
|
|
|
: 1 |
|
Taxons |
Structure entry #22954:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
|
|
|
: 1 |
|
Taxons |
- Lactosamine (Show) (Search Database)
- N-glycan core (Show) (Search Database)
| Chemical Formula: | C94H156N8O67 | #C | #H | #O | #N | |
| Molec. Weight: | 2469 | 94 | 156 | 67 | 8 | |
| # Atoms: | 325 | |||||
| # Residues: | 14 | |||||
| # Heavy Atoms: | 169 | |||||
Superclasses:
|
Residues:
|
||||||||||||||||||
Literature references: 81 - 5 of 8 literature references
Reference #21666
Takashima S; Kurogochi M; Tsukimura W; Mori M; Osumi K; Sugawara SI; Amano J; Mizuno M; Takada Y; Matsuda A
Preparation and biological activities of anti-HER2 monoclonal antibodies with multibranched complex-type N-glycans.
Published 2021 in Glycobiology, 31: 1401-1414
Reference contains 18 structures
Reference #533
Cooper GA; Rohrer JS
Separation of neutral asparagine-linked oligosaccharides by high-pH anion-exchange chromatography with pulsed amperometric detection
Published 1995 in Anal Biochem, 226: 182-184
Reference contains 12 structures
Reference #120
Korczak B; Goss P; Fernandez B; Baker M; Dennis JW
Branching N-linked oligosaccharides in breast cancer
Published 1994 in Adv Exp Med Biol, 353: 95-104
Reference contains 3 structures
Reference #7806
Ayouba A; Debray H; Rouge P
Fine sugar specificity of the Butea frondosa seed lectin
Published 1992 in Glycoconj J, 9: 141-147
Reference contains 26 structures
Reference #3974
Debray H; Montreuil J; Lis H; Sharon N
Affinity of four immobilized Erythrina lectins toward various N-linked glycopeptides and related oligosaccharides
Published 1986 in Carbohydr Res, 151: 359-369
Reference contains 43 structures
| NCBI Taxonomy ID | Scientific Name |
| 9606 | Homo sapiens |
Consortium for Functional Glycomics (CFG):
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