Glycosciences.de - Glycosciences.DB entry 510

☰
- Add title
- Add keywords
- Add publication
- Leave comment

Glycosciences.DB structure entry #510:

■ Expand all ■ Collapse all

Format: CarbBank LINUCS GlycoCT_condensed GlycoCT_xml


 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-D-Gal


RES
1b:x-dgal-HEX-x:x
2b:b-dglc-HEX-1:5
3s:n-acetyl
4b:b-dgal-HEX-1:5
LIN
1:1o(3+1)2d
2:2d(2+1)3n
3:2o(4+1)4d


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="x" superclass="hex" ringStart="-1" ringEnd="-1" name="x-dgal-HEX-x:x">
 <stemtype id="1" type="dgal" />
 </basetype>
 <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="3" name="n-acetyl" />
 <basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
 <stemtype id="1" type="dgal" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="o" childType="d">
 <parent pos="3" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="2" child="3">
 <linkage id="2" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="2" child="4">
 <linkage id="3" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 </sugar>

SNFG-style Graphics

3D Structure Model

download coordinates

Lactosamine (Show) (Search Database)

General Structure Data

Chemical Formula:	C₂₀H₃₅N₁O₁₆		#C	#H	#O	#N
Molec. Weight:	545		20	35	16	1
# Atoms:	72
# Residues:	3
# Heavy Atoms:	37

Superclasses:

Hex
Hex	2
HexNAc	1

Residues:

Residue	Count
B-D-GALP	1
B-D-GLCPNAC	1
D-GAL	1

NMR Proton Chemical Shift Info

MHz	500
Temperature	295
Solvent	D2O
Residue	Linkage	Proton	PPM	JFrom	JTo	Hz	Note
D-Gal		H1A	5.225			0
D-Gal		H1B	4.560			0
D-Gal		H4A	4.203			0
D-Gal		H4B	4.147			0
D-Gal		H5A	4.086			0
b-D-GlcpNAc	3	H1(A)	4.739			0
b-D-GlcpNAc	3	H1(B)	4.717			0
b-D-GlcpNAc	3	H6	3.957			0
b-D-GlcpNAc	3	NAC	2.036			0
b-D-Galp	4,3	H1	4.480			0
b-D-Galp	4,3	H4	3.928			0

Literature references: 30

1 - 5 of 30 literature references

Reference #7612

Fukushima K; Ohkura T; Kanai M; Kuroki M; Matsuoka Y; Kobata A; Yamashita K

Carbohydrate structures of a normal counterpart of the carcinoembryonic antigen produced by colon epithelial cells of normal adults

Published 1995 in Glycobiology, 5: 105-115

Reference contains 6 structures

Reference #6789

Hokke R; Damm JBL; Penninkhof B; Aitken RJ; Kamerling JP; Vliegenthart JFG

Structure of the O-linked carbohydrate chains of porcine zona pellucida glycoproteins

Published 1994 in Eur J Biochem, 221: 491-512

Reference contains 35 structures

Reference #7836

Nemansky M; van den Eijnden DH

Enzymatic characterization of CMP-NeuAc:Gal.beta.1-4GlcNAc-R .alpha.(2-3)-sialyltransferase from human placenta

Published 1993 in Glycoconj J, 10: 99-108

Reference contains 20 structures

Ichikawa Y; Look GC; Wong CH

Enzyme-catalyzed oligosaccharide synthesis

Published 1992 in Anal Biochem, 202: 215-238

Reference contains 87 structures

Reference #4545

Vilkman A; Niemelae R; Penttilae L; Helin J; Leppaenen A; Seppo A; Maaheimo H; Lusa S; Renkonen O

Elongation of both branches of biantennary backbones of oligo-(N-acetyllactosamino)glycans by human serum (1-3)-N-acetyl-.beta.-D-glucosaminyltransferase

Published 1992 in Carbohydr Res, 226: 155-174

Reference contains 23 structures

NCBI Taxonomy ID	Scientific Name
9606	Homo sapiens
10090	Mus musculus
9823	Sus scrofa

■ Expand all ■ Collapse all

© 2010-2016,2022 Justus-Liebig University Giessen, Institute of Veterinary Physiology and Biochemistry, Frankfurter Str. 100, 35392 Giessen, Germany
© 2017-2021 The Glycosciences.de crew
© 1997-2009 German Cancer Research Center Heidelberg, Central Spectroscopic Division, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany
All rights reserved.