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Glycosciences.DB structure entry #3019:
b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp
[][B-D-GLCP]{[(4+1)][B-D-GLCP]{[(4+1)][B-D-GLCP]{[(4+1)][B-D-GLCP]{}}}}
RES
1b:b-dglc-HEX-1:5
2b:b-dglc-HEX-1:5
3b:b-dglc-HEX-1:5
4b:b-dglc-HEX-1:5
LIN
1:1o(4+1)2d
2:2o(4+1)3d
3:3o(4+1)4d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>
3D Structure Model1 - 4 of 4 entries with matching glycan part
Structure entry #6366:
b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-O)-<3,5-dimethylphenylcarbamate>
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 : 1 |
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Taxons |
Structure entry #10006:
b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-1)-Methyl
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: 6 |
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Taxons |
Structure entry #11961:
b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-3)-<sitosterol>
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: 2 |
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Taxons: 1 |
Structure entry #18964:
b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1-1)-Acetate
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: 1 |
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Taxons |
| Chemical Formula: | C24H42O21 | #C | #H | #O | |
| Molec. Weight: | 666 | 24 | 42 | 21 | |
| # Atoms: | 87 | ||||
| # Residues: | 4 | ||||
| # Heavy Atoms: | 45 | ||||
Superclasses:
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Residues:
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PDB references: 461 - 5 of 46 PDB entries
PDB ID 7dkw:
Crystal structure of TxGH116 E441G nucleophile mutant from Thermoanaerobacterium xylanolyticum with autocondensation products from alpha-fluoroglucoside.
Description: Glucosylceramidase (E.C.3.2.1.45)
Source: Thermoanaerobacterium xylanolyticum LX-11
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78Å
Release date: 2021-06-23
Entry features 2 distinct glycan structures [2 instances].
PDB ID 6g1i:
GH124 cellulase from Ruminiclostridium thermocellum in complex with Mn and fructosylated cellopentaose
Description: Dockerin type 1
Source: Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99Å
Release date: 2018-08-15
Entry features 2 distinct glycan structures [4 instances].
PDB ID 5gm4:
Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 in complex with cellotetrose
Description: Endoglucanase-1 (E.C.3.2.1.4)
Source: Aspergillus aculeatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92Å
Release date: 2017-05-17
Entry features 1 distinct glycan structures [7 instances].
PDB ID 5gly:
Crystal structure of a glycoside hydrolase in complex with cellotetrose from Thielavia terrestris NRRL 8126
Description: Glycoside hydrolase family 45 protein
Source: Thielavia terrestris NRRL 8126
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58Å
Release date: 2017-04-19
Entry features 2 distinct glycan structures [2 instances].
PDB ID 5i79:
Crystal structure of a beta-1,4-endoglucanase mutant from Aspergillus niger in complex with sugar
Description: Endo-beta-1, 4-glucanase
Source: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35Å
Release date: 2016-12-21
Entry features 2 distinct glycan structures [4 instances].
Literature references: 41 - 4 of 4 literature references
Reference #20578
Urresti S; Cartmell A; Liu F; Walton PH; Davies GJ
Structural studies of the unusual metal-ion site of the GH124 endoglucanase from Ruminiclostridium thermocellum.
Published 2018 in Acta Crystallogr F Struct Biol Commun, 74: 496-505
Reference contains 3 structures
Reference #3691
Takeo K; Okushio K; Fukuyama K; Kuge T
Synthesis of cellobiose, cellotriose, cellotetraose, and lactose
Published 1983 in Carbohydr Res, 121: 163-173
Reference contains 4 structures
Reference #13882
Poppleton BJ
Crystal structure of cellulose model compounds. .beta.-D-Cellotetraose
Published 1972 in TAPPI Spec Tech Ass Publ No 8, 0: 66-73
Reference contains 1 structure
Reference #1042
Michell AJ
Spectra in the O-H stretching region of mono- and oligosaccharides at low temperatures
Published 1968 in Aust J Chem, 21: 1257-1266
Reference contains 2 structures
1 - 5 of 29 literature references from PDB entries
Reference #21481
Pengthaisong S; Hua Y; Ketudat Cairns JR
Structural basis for transglycosylation in glycoside hydrolase family GH116 glycosynthases.
Published 2021 in Arch Biochem Biophys, 706: 108924
Reference #20293
O'Neill EC; Pergolizzi G; Stevenson CEM; Lawson DM; Nepogodiev SA; Field RA
Cellodextrin phosphorylase from Ruminiclostridium thermocellum: X-ray crystal structure and substrate specificity analysis.
Published 2017 in Carbohydr. Res., :
Reference #20202
Gao J; Huang JW; Li Q; Liu W; Ko TP; Zheng Y; Xiao X; Kuo CJ; Chen CC; Guo RT
Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-β-endoglucanase from Thielavia terrestris.
Published 2017 in Enzyme Microb. Technol., 99: 32-37
Reference #20310
Meng DD; Liu X; Dong S; Wang YF; Ma XQ; Zhou H; Wang X; Yao LS; Feng Y; Li FL
Structural Insights into the Substrate Specificity of a Glycoside Hydrolase Family 5 Lichenase from Caldicellulosiruptor sp. F32.
Published 2017 in Biochem. J., :
Reference #19373
McGregor N; Morar M; Fenger TH; Stogios P; Lenfant N; Yin V; Xu X; Evdokimova E; Cui H; Henrissat B; Savchenko A; Brumer H
Structure-Function Analysis of a Mixed-linkage β-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B(1)4.
Published 2016 in J. Biol. Chem., 291: 1175-97
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