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Glycosciences.DB structure entry #27365:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp
[][B-D-GLCP]{[(3+1)][B-D-GLCP]{[(3+1)][B-D-GLCP]{}}}
RES
1b:b-dglc-HEX-1:5
2b:b-dglc-HEX-1:5
3b:b-dglc-HEX-1:5
LIN
1:1o(3+1)2d
2:2o(3+1)3d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>
3D Structure Model1 - 4 of 4 entries with matching glycan part
Structure entry #3024:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-1)-<4,5-epoxy-pentyl>
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Taxons |
Structure entry #16828:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-O)-<3-oxiranylpropyl>
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Taxons |
Structure entry #20067:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-7)-<3-phenoxybenzoate>
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: 1 |
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Taxons |
Structure entry #28542:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-1)-methyl
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: 1 |
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Residues:
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PDB references: 241 - 5 of 24 PDB entries
PDB ID 7c6t:
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to laminaritriose (Form I)
Description: Sugar ABC transporter, periplasmic sugar-binding protein
Source: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3Å
Release date: 2020-09-16
Entry features 1 distinct glycan structures [1 instances].
PDB ID 7c6v:
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to laminaritriose (Form II)
Description: Sugar ABC transporter, periplasmic sugar-binding protein
Source: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8Å
Release date: 2020-09-16
Entry features 1 distinct glycan structures [3 instances].
PDB ID 6r5u:
The crystal structure of Glycoside Hydrolase BglX inactive mutant from P. aeruginosa in complex with laminaritriose
Description:
Source: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15Å
Release date: 2020-04-15
Entry features 2 distinct glycan structures [2 instances].
PDB ID 5o9q:
Crystal structure of ScGas2 in complex with compound 6
Description: 1,3-beta-glucanosyltransferase GAS2 (E.C.2.4.1.-)
Source: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4Å
Release date: 2018-05-02
Entry features 1 distinct glycan structures [1 instances].
PDB ID 5o9r:
Crystal structure of ScGas2 in complex with compound 9
Description: 1,3-beta-glucanosyltransferase GAS2 (E.C.2.4.1.-)
Source: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7Å
Release date: 2018-05-02
Entry features 1 distinct glycan structures [1 instances].
Literature references from PDB entries: 91 - 5 of 9 literature references from PDB entries
Reference #22063
Chandravanshi M; Samanta R; Kanaujia SP
Conformational Trapping of a β-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
Published 2020 in J Mol Biol, 432: 5711-5734
Reference #22172
Mahasenan KV; Batuecas MT; De Benedetti S; Kim C; Rana N; Lee M; Hesek D; Fisher JF; Sanz-Aparicio J; Hermoso JA; Mobashery S
Catalytic Cycle of Glycoside Hydrolase BglX from and Its Implications for Biofilm Formation.
Published 2020 in ACS Chem Biol, 15: 189-196
Reference #20470
Delso I; Valero-Gonzalez J; Gomollón-Bel F; Castro-López J; Fang W; Navratilova I; van Aalten DMF; Tejero T; Merino P; Hurtado-Guerrero R
Inhibitors against Fungal Cell Wall Remodeling Enzymes.
Published 2018 in ChemMedChem, 13: 128-132
Reference #19141
Bianchetti CM; Takasuka TE; Deutsch S; Udell HS; Yik EJ; Bergeman LF; Fox BG
Active site and laminarin binding in glycoside hydrolase family 55.
Published 2015 in J. Biol. Chem., 290: 11819-32
Reference #18401
Wojtkowiak A; Witek K; Hennig J; Jaskolski M
Structures of an active-site mutant of a plant 1,3-β-glucanase in complex with oligosaccharide products of hydrolysis.
Published 2013 in Acta Crystallogr. D Biol. Crystallogr., 69: 52-62
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