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Glycosciences.DB structure entry #239:

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Format: CarbBank LINUCS


 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
                                 |
                            a-D-Manp-(1-6)+
                                 |        |
 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+        |
                                     b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn-(1-2)-Gly-(1-2)-Thr
 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+        |
                                 |        |
                            a-D-Manp-(1-3)+
                                 |
 b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

SNFG-style Graphics

3D Structure Model

download coordinates

Corresponding entries: 6

1 - 5 of 6 entries with matching glycan part

Structure entry #240:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+ | a-D-Manp-(1-6)+ | | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+ b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | | | | Asn-(1-2)-Lys a-D-Manp-(1-3)+ | | Thr-(1-2)-Pro-(1-2)+ b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

no 3d model

NMR spectra

literature references

no GlycoMaps

Structure entry #729:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+ | a-D-Manp-(1-6)+ | | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | | | a-D-Manp-(1-3)+ | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

no NMR spectra

literature references

no GlycoMaps

Structure entry #4950:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+ | a-D-Manp-(1-6)+ | | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+ b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | | | | Asn-(1-2)-Ala a-D-Manp-(1-3)+ | | Thr-(1-2)+ b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

no 3d model

no NMR spectra

literature references

no GlycoMaps

Structure entry #5730:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+ | a-D-Manp-(1-6)+ | | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-7)-<7-amino-4-methyl-2h-1-benzopyran-2-one> b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | | | a-D-Manp-(1-3)+ | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

no 3d model

no NMR spectra

literature references

no GlycoMaps

Taxons

Structure entry #22954:

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+ | a-D-Manp-(1-6)+ | | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ | b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | | | a-D-Manp-(1-3)+ | b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+

no NMR spectra

literature references

no GlycoMaps

Taxons

Lactosamine (Show) (2 x) (Search Database)
N-glycan core (Show) (2 x) (Search Database)

General Structure Data

Chemical Formula:	C₁₀₀H₁₆₆N₁₀O₇₀		#C	#H	#O	#N
Molec. Weight:	2627		100	166	70	10
# Atoms:	346
# Residues:	16
# Heavy Atoms:	180

Superclasses:

Hex
Hex	7
HexNAc	6

Residues:

Residue	Count
A-D-MANP	2
ASN	1
B-D-GALP	4
B-D-GLCPNAC	6
B-D-MANP	1
GLY	1
THR	1

Literature references: 5

1 - 5 of 5 literature references

Reference #7760

Bierhuizen MFA; Hansson M; Odin P; Debray H; Oebrink B; van Dijk W

Structural assessment of the N-linked oligosaccharides of cell-CAM 105 by lectin-agarose affinity chromatography

Published 1989 in Glycoconj J, 6: 195-208

Reference contains 11 structures

Reference #7724

Bierhuizen MFA; Edzes HT; Schiphorst WECM; van den Eijnden DH; van Dijk W

Effect of .alpha.(2-6)-linked sialic acid and .alpha.(1-3)-linked fucose on the interaction of N-linked glycopeptides and related oligosaccharides with immobilized Phaseolus vulgaris leukoagglutinating lectin (L-PHA)

Published 1988 in Glycoconj J, 5: 85-97

Reference contains 12 structures

Reference #9643

Joziasse DH; Schiphorst WECM; van den Eijnden DH; van Kuik JA; van Halbeek H; Vliegenthart JFG

Branch specificity of bovine colostrum CMP-sialic acid: Gal.beta.1-4GlcNAc-R .alpha.2-6-sialyltransferase. Sialylation of bi-, tri-, and tetraantennary oligosaccharides and glycopeptides of the N-acetyllactosamine type

Published 1987 in J Biol Chem, 262: 2025-2033

Reference contains 39 structures

Vliegenthart JFG; Dorland L; van Halbeek H

High-resolution, 1H-nuclear magnetic resonance spectroscopy as a tool in the structural analysis of carbohydrates related to glycoproteins

Published 1983 in Adv Carbohydr Chem Biochem, 41: 209-374

Reference contains 72 structures

Reference #7122

van Halbeek H; Dorland L; Vliegenthart JFG; Schmid K; Montreuil J; Fournet B; Hull WE

The application of 500-MHz 1H-NMR spectroscopy for the structure elucidation of N-acetyllactosamine type asparagine-bound carbohydrate chains of glycoproteins

Published 1980 in FEBS Lett, 114: 11-16

Reference contains 3 structures

NCBI Taxonomy ID	Scientific Name
9606	Homo sapiens

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