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Glycosciences.DB structure entry #22954:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
[][B-D-GLCPNAC]{[(4+1)][B-D-GLCPNAC]{[(4+1)][B-D-MANP]{[(3+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}[(4+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}[(6+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}[(6+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}}}}
RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:b-dglc-HEX-1:5
11s:n-acetyl
12b:b-dgal-HEX-1:5
13b:a-dman-HEX-1:5
14b:b-dglc-HEX-1:5
15s:n-acetyl
16b:b-dgal-HEX-1:5
17b:b-dglc-HEX-1:5
18s:n-acetyl
19b:b-dgal-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:6o(4+1)10d
10:10d(2+1)11n
11:10o(4+1)12d
12:5o(6+1)13d
13:13o(2+1)14d
14:14d(2+1)15n
15:14o(4+1)16d
16:13o(6+1)17d
17:17d(2+1)18n
18:17o(4+1)19d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="2" name="n-acetyl" />
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="4" name="n-acetyl" />
<basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="6" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="8" name="n-acetyl" />
<basetype id="9" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="10" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="11" name="n-acetyl" />
<basetype id="12" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="13" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="14" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="15" name="n-acetyl" />
<basetype id="16" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="17" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="18" name="n-acetyl" />
<basetype id="19" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="1" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="3" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="5" child="6">
<linkage id="5" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="6" parent="6" child="7">
<linkage id="6" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="7" parent="7" child="8">
<linkage id="7" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="8" parent="7" child="9">
<linkage id="8" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="9" parent="6" child="10">
<linkage id="9" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="10" parent="10" child="11">
<linkage id="10" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="11" parent="10" child="12">
<linkage id="11" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="12" parent="5" child="13">
<linkage id="12" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="13" parent="13" child="14">
<linkage id="13" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="14" parent="14" child="15">
<linkage id="14" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="15" parent="14" child="16">
<linkage id="15" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="16" parent="13" child="17">
<linkage id="16" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="17" parent="17" child="18">
<linkage id="17" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="18" parent="17" child="19">
<linkage id="18" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>

1 - 5 of 6 entries with matching glycan part

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
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a-D-Manp-(1-6)+
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b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn-(1-2)-Gly-(1-2)-Thr
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
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Taxons: 1 |

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | |
| | Asn-(1-2)-Lys
a-D-Manp-(1-3)+ |
| Thr-(1-2)-Pro-(1-2)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
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Taxons: 1 |

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-Asn
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
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Taxons: 1 |

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ | |
| | Asn-(1-2)-Ala
a-D-Manp-(1-3)+ |
| Thr-(1-2)+
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
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Taxons: 1 |

b-D-Galp-(1-4)-b-D-GlcpNAc-(1-6)+
|
a-D-Manp-(1-6)+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+ |
b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-7)-<7-amino-4-methyl-2h-1-benzopyran-2-one>
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-4)+ |
| |
a-D-Manp-(1-3)+
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)+
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Taxons |
- N-glycan core (Show) (Search Database)
- Lactosamine (Show) (Search Database)
Superclasses:
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Residues:
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1 - 1 of 1 literature references

Reference #20811
Sato T; Tateno H; Kaji H; Chiba Y; Kubota T; Hirabayashi J; Narimatsu H
Engineering of recombinant Wisteria floribunda agglutinin specifically binding to GalNAcβ1,4GlcNAc (LacdiNAc).
Published 2017 in Glycobiology, 27: 743–754
Reference contains 20 structures
Consortium for Functional Glycomics (CFG):
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