- ☰
- Add title
- Add keywords
- Add publication
- Leave comment
Glycosciences.DB structure entry #22682:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp
[][B-D-GLCP]{[(3+1)][B-D-GLCP]{[(3+1)][B-D-GLCP]{[(3+1)][B-D-GLCP]{[(3+1)][B-D-GLCP]{[(3+1)][B-D-GLCP]{}}}}}}
RES
1b:b-dglc-HEX-1:5
2b:b-dglc-HEX-1:5
3b:b-dglc-HEX-1:5
4b:b-dglc-HEX-1:5
5b:b-dglc-HEX-1:5
6b:b-dglc-HEX-1:5
LIN
1:1o(3+1)2d
2:2o(3+1)3d
3:3o(3+1)4d
4:4o(3+1)5d
5:5o(3+1)6d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="4" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<basetype id="6" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="2" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="4" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="5" child="6">
<linkage id="5" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>
3D Structure Model1 - 3 of 3 entries with matching glycan part
Structure entry #27520:
b-L-6-deoxy-Fruf
 |
 |
 : 1 |
 no Ref |
 |
Taxons |
Structure entry #27521:
a-D-Psif
 |
|
: 1 |
no Ref |
|
Taxons |
Structure entry #28543:
b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-1)-methyl
|
|
 |
: 1 |
|
Taxons |
Superclasses:
|
Residues:
|
||||||||
PDB references: 91 - 5 of 9 PDB entries
PDB ID 6hq8:
Bacterial beta-1,3-oligosaccharide phosphorylase from GH149 with laminarihexaose bound at a surface site
Description: Beta-1,3-oligosaccharide phosphorylase (E.C.2.4.1.-)
Source: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25Å
Release date: 2019-06-12
Entry features 1 distinct glycan structures [2 instances].
PDB ID 5xc2:
Crystal structure of GH family 81 beta-1,3-glucanase from Rhizomucr miehei complexed with laminarihexaose
Description: Endo-beta-1,3-glucanase (E.C.3.2.1.39)
Source: Rhizomucor miehei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7Å
Release date: 2018-03-28
Entry features 4 distinct glycan structures [12 instances].
PDB ID 5t4c:
Crystal structure of BhGH81 mutant in complex with laminaro-hexaose
Description: Glycoside Hydrolase
Source: Bacillus halodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8Å
Release date: 2017-06-28
Entry features 2 distinct glycan structures [2 instances].
PDB ID 4pf0:
Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminarihexaose
Description: sacteLam55A
Source: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75Å
Release date: 2015-03-18
Entry features 2 distinct glycan structures [4 instances].
PDB ID 4tz5:
Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminarihexaose
Description: sacteLam55A
Source: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75Å
Release date: 2015-03-18
Entry features 2 distinct glycan structures [4 instances].
Literature references from PDB entries: 41 - 4 of 4 literature references from PDB entries
Reference #21143
Kuhaudomlarp S; Stevenson CEM; Lawson DM; Field RA
The structure of a GH149 β-(1 → 3) glucan phosphorylase reveals a new surface oligosaccharide binding site and additional domains that are absent in the disaccharide-specific GH94 glucose-β-(1 → 3)-glucose (laminaribiose) phosphorylase.
Published 2019 in Proteins, :
Reference #19141
Bianchetti CM; Takasuka TE; Deutsch S; Udell HS; Yik EJ; Bergeman LF; Fox BG
Active site and laminarin binding in glycoside hydrolase family 55.
Published 2015 in J. Biol. Chem., 290: 11819-32
Reference #17892
Kanagawa M; Satoh T; Ikeda A; Adachi Y; Ohno N; Yamaguchi Y
Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor.
Published 2011 in J. Biol. Chem., 286: 29158-65
Reference #16097
Boraston AB; Nurizzo D; Notenboom V; Ducros V; Rose DR; Kilburn DG; Davies GJ
Differential oligosaccharide recognition by evolutionarily-related beta-1,4 and beta-1,3 glucan-binding modules.
Published 2002 in J. Mol. Biol., 319: 1143-56
×
Add title to glycan structure entry:
×
Add keyword to glycan structure entry:
×
Add publication to glycan structure entry:
×