Glycosciences.de - Glycosciences.DB entry 22664

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Glycosciences.DB structure entry #22664:


b-D-Manp-(1-4)-a-D-GlcpNAc-(1-4)-b-D-GlcpNAc-(1-4)-ASN


<?xml version="1.0" encoding="UTF-8"?>
 <sugar version="1.0">
 <residues>
 <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="2" name="n-acetyl" />
 <basetype id="3" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dglc-HEX-1:5">
 <stemtype id="1" type="dglc" />
 </basetype>
 <substituent id="4" name="n-acetyl" />
 <basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dman-HEX-1:5">
 <stemtype id="1" type="dman" />
 </basetype>
 </residues>
 <linkages>
 <connection id="1" parent="1" child="2">
 <linkage id="1" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="2" parent="1" child="3">
 <linkage id="2" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="3" parent="3" child="4">
 <linkage id="3" parentType="d" childType="n">
 <parent pos="2" />
 <child pos="1" />
 </linkage>
 </connection>
 <connection id="4" parent="3" child="5">
 <linkage id="4" parentType="o" childType="d">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </connection>
 </linkages>
 <aglyca>
 <historicalData>
 <entry id="0" name="ASN" toResidue="1">
 <linkage parentType="n" childType="x">
 <parent pos="4" />
 <child pos="1" />
 </linkage>
 </entry>
 </historicalData>
 </aglyca>
 </sugar>

download coordinates

Superclasses:

Hex
Hex	1
HexNAc	2

Residues:

Residue	Count
A-D-GLCPNAC	1
ASN	1
B-D-GLCPNAC	1
B-D-MANP	1

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PDB references: 18

1 - 5 of 18 PDB entries

PDB ID 7oih: Glycosylation in the crystal structure of neutrophil myeloperoxidase

Description:

Source: Homo sapiens

Experimental method: X-RAY DIFFRACTION

Resolution: 2.603Å

Release date: 2022-08-24

Entry features 13 distinct glycan structures [30 instances].

PDB ID 7rdw: Crystal Structure of FH1 Fab bound to HXb2 HIV-1 gp120 core

Description:

Source: Human immunodeficiency virus 1, Homo sapiens

Experimental method: X-RAY DIFFRACTION

Resolution: 3.55Å

Release date: 2022-05-25

Entry features 3 distinct glycan structures [32 instances].

PDB ID 7bsw: Cryo-EM structure of a human ATP11C-CDC50A flippase in PtdEtn-occluded E2-AlF state

Description: ATP11C, CDC50A

Source: Homo sapiens

Experimental method: ELECTRON MICROSCOPY

Release date: 2020-09-30

Entry features 2 distinct glycan structures [2 instances].

PDB ID 6usf: CryoEM structure of human alpha4beta2 nicotinic acetylcholine receptor with varenicline in complex with anti-BRIL synthetic antibody BAK5

Description: Neuronal acetylcholine receptor subunit alpha-4,Soluble cytochrome b562, Neuronal acetylcholine receptor subunit beta-2, Fab heavy chain, Fab light chain

Source: Homo sapiens

Experimental method: ELECTRON MICROSCOPY

Release date: 2020-04-29

Entry features 3 distinct glycan structures [5 instances].

PDB ID 3n8w: Crystal Structure of R120Q/Native Cyclooxygenase-1 Heterodimer mutant in complex with Flurbiprofen

Description: Prostaglandin G/H synthase 1 (E.C.1.14.99.1)

Source: Ovis aries

Experimental method: X-RAY DIFFRACTION

Resolution: 2.75Å

Release date: 2010-07-28

Entry features 6 distinct glycan structures [6 instances].