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Glycosciences.DB structure entry #218:
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)-a-D-Manp-(1-6)+
|
b-D-Manp-(1-4)-D-GlcNAc
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-2)-a-D-Manp-(1-3)+
[][D-GLCNAC]{[(4+1)][B-D-MANP]{[(3+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}[(6+1)][A-D-MANP]{[(2+1)][B-D-GLCPNAC]{[(4+1)][B-D-GALP]{}}}}}
RES
1b:x-dglc-HEX-x:x
2s:n-acetyl
3b:b-dman-HEX-1:5
4b:a-dman-HEX-1:5
5b:b-dglc-HEX-1:5
6s:n-acetyl
7b:b-dgal-HEX-1:5
8b:a-dman-HEX-1:5
9b:b-dglc-HEX-1:5
10s:n-acetyl
11b:b-dgal-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3o(3+1)4d
4:4o(2+1)5d
5:5d(2+1)6n
6:5o(4+1)7d
7:3o(6+1)8d
8:8o(2+1)9d
9:9d(2+1)10n
10:9o(4+1)11d
<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
<residues>
<basetype id="1" anomer="x" superclass="hex" ringStart="-1" ringEnd="-1" name="x-dglc-HEX-x:x">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="2" name="n-acetyl" />
<basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="4" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="6" name="n-acetyl" />
<basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
<basetype id="8" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
<stemtype id="1" type="dman" />
</basetype>
<basetype id="9" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
<stemtype id="1" type="dglc" />
</basetype>
<substituent id="10" name="n-acetyl" />
<basetype id="11" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
<stemtype id="1" type="dgal" />
</basetype>
</residues>
<linkages>
<connection id="1" parent="1" child="2">
<linkage id="1" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="2" parent="1" child="3">
<linkage id="2" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="3" parent="3" child="4">
<linkage id="3" parentType="o" childType="d">
<parent pos="3" />
<child pos="1" />
</linkage>
</connection>
<connection id="4" parent="4" child="5">
<linkage id="4" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="5" parent="5" child="6">
<linkage id="5" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="6" parent="5" child="7">
<linkage id="6" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
<connection id="7" parent="3" child="8">
<linkage id="7" parentType="o" childType="d">
<parent pos="6" />
<child pos="1" />
</linkage>
</connection>
<connection id="8" parent="8" child="9">
<linkage id="8" parentType="o" childType="d">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="9" parent="9" child="10">
<linkage id="9" parentType="d" childType="n">
<parent pos="2" />
<child pos="1" />
</linkage>
</connection>
<connection id="10" parent="9" child="11">
<linkage id="10" parentType="o" childType="d">
<parent pos="4" />
<child pos="1" />
</linkage>
</connection>
</linkages>
</sugar>

- Lactosamine (Show) (Search Database)
Chemical Formula: | C54H91N3O41 | #C | #H | #O | #N | |
Molec. Weight: | 1438 | 54 | 91 | 41 | 3 | |
# Atoms: | 189 | |||||
# Residues: | 8 | |||||
# Heavy Atoms: | 98 |
Superclasses:
|
Residues:
|
MHz | 400 | ||||||
Temperature | 300 | ||||||
Solvent | D2O | ||||||
Residue | Linkage | Proton | PPM | JFrom | JTo | Hz | Note |
D-GlcNAc | H1A | 5.210 | 0 | ||||
D-GlcNAc | H1B | 4.723 | 0 | ||||
D-GlcNAc | H2A | 3.887 | 0 | ||||
D-GlcNAc | H2B | 3.717 | 0 | ||||
D-GlcNAc | H3A | 3.928 | 0 | ||||
D-GlcNAc | H3B | 3.730 | 0 | ||||
D-GlcNAc | H4A | 3.717 | 0 | ||||
D-GlcNAc | H4B | 3.709 | 0 | ||||
D-GlcNAc | H5A | 3.935 | 0 | ||||
D-GlcNAc | H5B | 3.580 | 0 | ||||
D-GlcNAc | H6A | 3.780 | 0 | ||||
D-GlcNAc | NACA | 2.061 | 0 | ||||
D-GlcNAc | NACB | 2.058 | 0 | ||||
b-D-Manp | 4 | H1(A) | 4.775 | 0 | |||
b-D-Manp | 4 | H1(B) | 4.764 | 0 | |||
b-D-Manp | 4 | H2(A) | 4.257 | 0 | |||
b-D-Manp | 4 | H2(B) | 4.246 | 0 | |||
b-D-Manp | 4 | H3 | 3.775 | 0 | |||
b-D-Manp | 4 | H4(A) | 3.803 | 0 | |||
b-D-Manp | 4 | H4(B) | 3.818 | 0 | |||
b-D-Manp | 4 | H5(A) | 3.576 | 0 | |||
b-D-Manp | 4 | H5(B) | 3.646 | 0 | |||
b-D-Manp | 4 | H6 | 3.787 | 0 | |||
b-D-Manp | 4 | H6' | 3.982 | 0 | |||
a-D-Manp | 6,4 | H1(A) | 4.924 | 0 | |||
a-D-Manp | 6,4 | H1(B) | 4.929 | 0 | |||
a-D-Manp | 6,4 | H2 | 4.112 | 0 | |||
a-D-Manp | 6,4 | H3(A) | 3.910 | 0 | |||
a-D-Manp | 6,4 | H3(B) | 3.883 | 0 | |||
a-D-Manp | 6,4 | H4 | 3.496 | 0 | |||
a-D-Manp | 6,4 | H5 | 3.621 | 0 | |||
a-D-Manp | 6,4 | H6 | 3.623 | 0 | |||
a-D-Manp | 6,4 | H6' | 3.920 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H1 | 4.582 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H2 | 3.750 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H3 | 3.709 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H4 | 3.724 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H5 | 3.576 | 0 | |||
b-D-GlcpNAc | 2,6,4 | H6 | 3.834 | 0 | |||
b-D-GlcpNAc | 2,6,4 | NAC(A) | 2.049 | 0 | |||
b-D-GlcpNAc | 2,6,4 | NAC(B) | 2.046 | 0 | |||
b-D-Galp | 4,2,6,4 | H1(A) | 4.470 | 0 | |||
b-D-Galp | 4,2,6,4 | H1(B) | 4.472 | 0 | |||
b-D-Galp | 4,2,6,4 | H2 | 3.535 | 0 | |||
b-D-Galp | 4,2,6,4 | H3 | 3.664 | 0 | |||
b-D-Galp | 4,2,6,4 | H4 | 3.926 | 0 | |||
b-D-Galp | 4,2,6,4 | H5 | 3.732 | 0 | |||
b-D-Galp | 4,2,6,4 | H6 | 3.740 | 0 | |||
b-D-Galp | 4,2,6,4 | H6' | 3.780 | 0 | |||
a-D-Manp | 3,4 | H1 | 5.122 | 0 | |||
a-D-Manp | 3,4 | H2 | 4.191 | 0 | |||
a-D-Manp | 3,4 | H3 | 3.902 | 0 | |||
a-D-Manp | 3,4 | H4 | 3.508 | 0 | |||
a-D-Manp | 3,4 | H5 | 3.750 | 0 | |||
a-D-Manp | 3,4 | H6 | 3.623 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H1 | 4.582 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H2 | 3.750 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H3 | 3.732 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H4 | 3.724 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H5 | 3.576 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H6 | 3.834 | 0 | |||
b-D-GlcpNAc | 2,3,4 | H6' | 3.998 | 0 | |||
b-D-GlcpNAc | 2,3,4 | NAC | 2.052 | 0 | |||
b-D-Galp | 4,2,3,4 | H1 | 4.466 | 0 | |||
b-D-Galp | 4,2,3,4 | H2 | 3.535 | 0 | |||
b-D-Galp | 4,2,3,4 | H3 | 3.664 | 0 | |||
b-D-Galp | 4,2,3,4 | H4 | 3.926 | 0 | |||
b-D-Galp | 4,2,3,4 | H5 | 3.732 | 0 | |||
b-D-Galp | 4,2,3,4 | H6 | 3.740 | 0 | |||
b-D-Galp | 4,2,3,4 | H6' | 3.780 | 0 |
1 - 5 of 35 literature references

Reference #21937
Huang C; Seino J; Fujihira H; Sato K; Fujinawa R; Sumer-Bayraktar Z; Ishii N; Matsuo I; Nakaya S; Suzuki T
Occurrence of free N-glycans with a single GlcNAc at the reducing termini in animal sera.
Published 2022 in Glycobiology, 32: 314-332
Reference contains 54 structures

Reference #5146
Helin J; Maaheimo H; Seppo A; Keane A; Renkonen O
Stepwise transfer of .alpha.-D-Galp-(1-3)-.beta.-D-Galp-(1-4)-.beta.-D-GlcpNAc sequences to 3-OH and 6-OH of distal galactose residues in bi-, tri-, and tetra-antennary asialo-glycans of N-linked complex type
Published 1995 in Carbohydr Res, 266: 191-209
Reference contains 16 structures

Reference #1823
Feizi T; Solomon JC; Yuen CT; Jeng KCG; Frigeri LG; Hsu DK; Liu FT
The adhesive specificity of the soluble human lectin, IgE-binding protein, toward lipid-linked oligosaccharides. Presence of the blood group A, B, B-like, and H monosaccharides confers a binding activity to tetrasaccharide (lacto-N-tetraose and lacto-N-n
Published 1994 in Biochemistry, 33: 6342-6349
Reference contains 1 structure

Reference #11239
Spengler B; Kirsch D; Kaufmann R; Lemoine J
Structure analysis of branched oligosaccharides using post-source decay in matrix-assisted laser desorption ionization mass spectrometry
Published 1994 in J Mass Spectrom, 30: 782-787
Reference contains 4 structures

Reference #93
Imberty A; Bourne Y; Cambillau C; Rouge P; Perez S
Oligosaccharide conformation in protein/carbohydrate complexes
Published 1993 in Adv Biophys Chem, 3: 71-117
Reference contains 9 structures
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